PlantSME Plant secondary metabolism enzyme database
GGPPS

GGPPS

Atlas summary family GGPPS.

Lineage Coverage
Detected in 81 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Gossypium arboreum
Armoracia rusticana
Gossypium hirsutum
Brasenia schreberi
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 100 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g051210.p01 vitis_berlandieri_x_rupestris vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g051210.p01
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr15.ver1.0.g209590.p01 vitis_berlandieri_x_rupestris vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr15.ver1.0.g209590.p01
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr18.ver1.0.g255680.p01 vitis_berlandieri_x_rupestris vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr18.ver1.0.g255680.p01
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr19.ver1.0.g268610.p01 vitis_berlandieri_x_rupestris vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr19.ver1.0.g268610.p01
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr19.ver1.0.g273960.p01 vitis_berlandieri_x_rupestris vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr19.ver1.0.g273960.p01
vitis_labrusca_augustus-18-processed-gene-99.10-mRNA-1 vitis_labrusca vitis_labrusca_augustus-18-processed-gene-99.10-mRNA-1
vitis_labrusca_augustus-19-processed-gene-80.6-mRNA-1 vitis_labrusca vitis_labrusca_augustus-19-processed-gene-80.6-mRNA-1
vitis_labrusca_maker-15-augustus-gene-15.18-mRNA-1 vitis_labrusca vitis_labrusca_maker-15-augustus-gene-15.18-mRNA-1
vitis_labrusca_maker-19-augustus-gene-0.37-mRNA-1 vitis_labrusca vitis_labrusca_maker-19-augustus-gene-0.37-mRNA-1
vitis_labrusca_snap-18-processed-gene-211.11-mRNA-1 vitis_labrusca vitis_labrusca_snap-18-processed-gene-211.11-mRNA-1
vitis_labrusca_snap-4-processed-gene-186.19-mRNA-1 vitis_labrusca vitis_labrusca_snap-4-processed-gene-186.19-mRNA-1
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr03.ver1.0.g034400.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr03.ver1.0.g034400.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr04.ver1.0.g057040.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr04.ver1.0.g057040.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr05.ver1.0.g065180.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr05.ver1.0.g065180.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr05.ver1.0.g065190.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr05.ver1.0.g065190.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g244580.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g244580.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr17.ver1.0.g279710.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr17.ver1.0.g279710.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g310910.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g310910.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr19.ver1.0.g323390.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr19.ver1.0.g323390.p01
VIT_03s0132g00010.t01 vitis_vinifera VIT_03s0132g00010.t01
VIT_04s0023g01210.t01 vitis_vinifera VIT_04s0023g01210.t01
VIT_05s0020g01240.t01 vitis_vinifera VIT_05s0020g01240.t01
VIT_15s0024g00850.t01 vitis_vinifera VIT_15s0024g00850.t01
VIT_17s0000g01180.t01 vitis_vinifera VIT_17s0000g01180.t01
VIT_18s0001g12000.t01 vitis_vinifera VIT_18s0001g12000.t01
VIT_19s0014g00070.t01 vitis_vinifera VIT_19s0014g00070.t01
VIT_19s0090g00530.t01 vitis_vinifera VIT_19s0090g00530.t01
Vcarscaffold_160037460.1 volvox_carteri Vcarscaffold_160037460.1
Vcarscaffold_280071770.1 volvox_carteri Vcarscaffold_280071770.1
Vcarscaffold_310082890.1 volvox_carteri Vcarscaffold_310082890.1