PlantSME Plant secondary metabolism enzyme database
HMGR

HMGR

Atlas summary family HMGR.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pinus taeda
Fragaria ananassa
Abies alba
Brassica carinata
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 3794 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
fragaria_iinumae_evm.model.scaf_4.2199 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2199
fragaria_iinumae_evm.model.scaf_4.2203 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2203
fragaria_iinumae_evm.model.scaf_4.2204 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2204
fragaria_iinumae_evm.model.scaf_4.2206 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2206
fragaria_iinumae_evm.model.scaf_79.874 fragaria_iinumae fragaria_iinumae_evm.model.scaf_79.874
fragaria_mandshurica_evm.model.chr2.1249 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1249
fragaria_mandshurica_evm.model.chr2.1250 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1250
fragaria_mandshurica_evm.model.chr2.1252 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1252
fragaria_mandshurica_evm.model.chr2.1253 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1253
fragaria_mandshurica_evm.model.chr2.1381 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1381
fragaria_mandshurica_evm.model.chr2.622 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.622
fragaria_mandshurica_evm.model.chr5.3194 fragaria_mandshurica fragaria_mandshurica_evm.model.chr5.3194
FnilGWHABKC000000040155250.1 fragaria_nilgerrensis FnilGWHABKC000000040155250.1
FnilGWHABKC000000040155340.1 fragaria_nilgerrensis FnilGWHABKC000000040155340.1
FnilGWHABKC000000040155350.1 fragaria_nilgerrensis FnilGWHABKC000000040155350.1
FnilGWHABKC000000040155380.1 fragaria_nilgerrensis FnilGWHABKC000000040155380.1
FnilGWHABKC000000040155390.1 fragaria_nilgerrensis FnilGWHABKC000000040155390.1
FnilGWHABKC000000040155400.1 fragaria_nilgerrensis FnilGWHABKC000000040155400.1
FnilGWHABKC000000050203420.1 fragaria_nilgerrensis FnilGWHABKC000000050203420.1
FnilGWHABKC000001780283900.1 fragaria_nilgerrensis FnilGWHABKC000001780283900.1
FnilGWHABKC000001780283920.1 fragaria_nilgerrensis FnilGWHABKC000001780283920.1
fragaria_nipponica_augustus_masked-chr2-processed-gene-181.112-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr2-processed-gene-181.112-mRNA-1
fragaria_nipponica_augustus_masked-chr2-processed-gene-181.113-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr2-processed-gene-181.113-mRNA-1
fragaria_nipponica_augustus_masked-chr2-processed-gene-181.114-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr2-processed-gene-181.114-mRNA-1
fragaria_nipponica_maker-chr1-augustus-gene-65.93-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr1-augustus-gene-65.93-mRNA-1
fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-181.66-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-181.66-mRNA-1
fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-181.77-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-181.77-mRNA-1
fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-182.106-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-exonerate_protein2genome-gene-182.106-mRNA-1
fragaria_nipponica_maker-chr5-augustus-gene-150.21-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr5-augustus-gene-150.21-mRNA-1
fragaria_nubicola_evm.model.ctg109.111 fragaria_nubicola fragaria_nubicola_evm.model.ctg109.111