PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
actinidia_zhejiangensis_GWHPCBQB022674 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB022674
actinidia_zhejiangensis_GWHPCBQB028896 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB028896
actinidia_zhejiangensis_GWHPCBQB028897 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB028897
actinidia_zhejiangensis_GWHPCBQB071553 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB071553
actinidia_zhejiangensis_GWHPCBQB077933 actinidia_zhejiangensis actinidia_zhejiangensis_GWHPCBQB077933
Acor02G0017210.1 aegiceras_corniculatum Acor02G0017210.1
Acor02G0017300.1 aegiceras_corniculatum Acor02G0017300.1
Acortig00003122_pilon0003550.1 aegiceras_corniculatum Acortig00003122_pilon0003550.1
Atau6DG0030070.1 aegilops_tauschii Atau6DG0030070.1
Atau6DG0030070.2 aegilops_tauschii Atau6DG0030070.2
Atau6DG0030070.3 aegilops_tauschii Atau6DG0030070.3
Al_clc_g11984 aeluropus_littoralis Al_clc_g11984
Al_clc_g2499 aeluropus_littoralis Al_clc_g2499
Al_clc_g6484 aeluropus_littoralis Al_clc_g6484
Asubscaffold_100018620 aerobryopsis_subdivergens Asubscaffold_100018620
Asubscaffold_150161030 aerobryopsis_subdivergens Asubscaffold_150161030
Aeve05G0009980.1 aeschynomene_evenia Aeve05G0009980.1
AaraAA_scaffold19600108780 aethionema_arabicum AaraAA_scaffold19600108780
AaraAA_scaffold54400275940 aethionema_arabicum AaraAA_scaffold54400275940
GWHPBISH003444 akebia_trifoliata GWHPBISH003444
GWHPBISH006470 akebia_trifoliata GWHPBISH006470
Avestig00003980_pilon0184730.1 aldrovanda_vesiculosa Avestig00003980_pilon0184730.1
Agluscaffold424596_cov1030253810 alnus_glutinosa Agluscaffold424596_cov1030253810
alnus_rubra_ALNRU00062429-RA alnus_rubra alnus_rubra_ALNRU00062429-RA
alnus_rubra_ALNRU00062440-RA alnus_rubra alnus_rubra_ALNRU00062440-RA
alstonia_scholaris_tjs10582 alstonia_scholaris alstonia_scholaris_tjs10582
alstonia_scholaris_tjs15012 alstonia_scholaris alstonia_scholaris_tjs15012
AcruScioBoG_17730_HRSCAF_178110098400.1 amaranthus_cruentus AcruScioBoG_17730_HRSCAF_178110098400.1
AcruScioBoG_18778_HRSCAF_188630114430.1 amaranthus_cruentus AcruScioBoG_18778_HRSCAF_188630114430.1
AMhypScaffold_120054050.1 amaranthus_hypochondriacus AMhypScaffold_120054050.1