PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
AMhypScaffold_70198360.1 amaranthus_hypochondriacus AMhypScaffold_70198360.1
amaranthus_tricolor_g18381.t1 amaranthus_tricolor amaranthus_tricolor_g18381.t1
amaranthus_tricolor_g18383.t1 amaranthus_tricolor amaranthus_tricolor_g18383.t1
amaranthus_tricolor_g6073.t1 amaranthus_tricolor amaranthus_tricolor_g6073.t1
At.02g062900-v1.1.a1 amaranthus_tuberculatus At.02g062900-v1.1.a1
At.07g236200-v1.1.a1 amaranthus_tuberculatus At.07g236200-v1.1.a1
At.07g236220-v1.1.a1 amaranthus_tuberculatus At.07g236220-v1.1.a1
AtriAmTr_v1.0_scaffold000010003050.1 amborella_trichopoda AtriAmTr_v1.0_scaffold000010003050.1
AtriAmTr_v1.0_scaffold000320098560.1 amborella_trichopoda AtriAmTr_v1.0_scaffold000320098560.1
AnanContig000260014000.1 ammopiptanthus_nanus AnanContig000260014000.1
AedgHiC_scaffold_110072790 amphicarpaea_edgeworthii AedgHiC_scaffold_110072790
Abra02G0006750.1 ananas_bracteatus Abra02G0006750.1
Abra04G0009090.1 ananas_bracteatus Abra04G0009090.1
Acom01G0012880.1 ananas_comosus Acom01G0012880.1
Acom03G0008030.1 ananas_comosus Acom03G0008030.1
Arupctg001142_np121212120116670 andreaea_rupestris Arupctg001142_np121212120116670
Awil1700045080 andreaea_wilsonii Awil1700045080
Amac1588870056570 andreaeobryum_macrosporum Amac1588870056570
andrographis_paniculata_XP_051151264.1 andrographis_paniculata andrographis_paniculata_XP_051151264.1
angelica_sinensis_AS02G01566-RA angelica_sinensis angelica_sinensis_AS02G01566-RA
anisodus_acutangulus_KAJ8555809.1 anisodus_acutangulus anisodus_acutangulus_KAJ8555809.1
annona_cherimola_Anche102Chr3g0034220.1 annona_cherimola annona_cherimola_Anche102Chr3g0034220.1
annona_cherimola_Anche102Chr7g0040690.1 annona_cherimola annona_cherimola_Anche102Chr7g0040690.1
Aatt558330157590 anomodon_attenuatus Aatt558330157590
AagrBONNSc2ySwM_344G0017580 anthoceros_agrestis_bonn AagrBONNSc2ySwM_344G0017580
AagrOXFutg000006l0028920.1 anthoceros_agrestis_oxford AagrOXFutg000006l0028920.1
AagrOXFutg000006l0028920.2 anthoceros_agrestis_oxford AagrOXFutg000006l0028920.2
AagrOXFutg000006l0028920.3 anthoceros_agrestis_oxford AagrOXFutg000006l0028920.3
AagrOXFutg000006l0028920.4 anthoceros_agrestis_oxford AagrOXFutg000006l0028920.4
AANG012635 anthoceros_angustus AANG012635