PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
AedgContig00000020000070 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_100038780 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_100038800 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_100052050 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_100052060 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_110065670 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_110065700 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_20079860 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_20088940 Alkaloid 16OMT low borderline
AedgHiC_scaffold_30105280 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30105370 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30105400 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30105410 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30105820 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30116120 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30121530 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30121540 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30121550 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30121560 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30129080 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50164030 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50164750 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50164760 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50164770 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50164780 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_50168590 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_70226720 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_80253980 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_80253990 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_80254000 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_90261920 Alkaloid 16OMT medium borderline
AedgHiC_scaffold_30105360 Alkaloid 6OMT_4OMT_SOMT medium borderline
AedgHiC_scaffold_80253950 Alkaloid 6OMT_4OMT_SOMT medium borderline
AedgHiC_scaffold_10002080 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10002100 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100035560 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100042510 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100045250 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100047040 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_100047060 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_100047080 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_100054060 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100054070 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_100054080 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10014850 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10021590 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10021600 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10021610 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10028480 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_10029390 Alkaloid 7DLGT low borderline