Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.53% Phenylpropanoid pathway 21.42% Alkaloid pathway 20.58% Flavonoid pathway 12.05% Rosmarinic acid pathway 8.95% Steroid pathway 7.47%

Family Distribution

1419 Candidate Genes

C4H 7.05% C3'H/CYP98A 6.5% BAHD 5.05% T3O 4.24% CYP76 4.21% UGT 4.03% IFS 3.85% POD 3.8%

Other Families 61.27%

More Families (98)

4CL 141 3.67% 7DLGT 123 3.2% DWF4/CYP90B1 115 2.99% UFGT 105 2.73% F3'H/CYP75B 101 2.63% F3H 96 2.5% NMT 89 2.31% CYP71 69 1.79% BR6OX2/CYP85A2 63 1.64% CODM/T6ODM 62 1.61% SMT1/SMT2/SMT3 62 1.61% CAS 60 1.56% STR 57 1.48% H6H 56 1.46% COMT 46 1.2% CYP90D1 45 1.17% TPS 45 1.17% LAC 42 1.09% IFR 39 1.01% T16H 37 0.96% SGD 36 0.94% GES 36 0.94% CAD 34 0.88% PYKS 33 0.86% 16OMT 31 0.81% PMT 28 0.73% F5H/CYP84A 28 0.73% IO 27 0.7% HCT 27 0.7% CSE 27 0.7% RAS 25 0.65% TRI/TRII 24 0.62% 7DLH 23 0.6% ANS/LDOX 23 0.6% COR 22 0.57% G8O/G8H 22 0.57% F3'5'H/CYP75A 22 0.57% CCR 21 0.55% NCS 20 0.52% GS 20 0.52% FNS 20 0.52% PAL 18 0.47% CYP51G1 18 0.47% CPD/CYP90A1 18 0.47% BR6OX1/CYP85A1 17 0.44% ANR 16 0.42% SLS 15 0.39% CHS 15 0.39% MPO 14 0.36% 8HGO 13 0.34% TAT 13 0.34% DFR 12 0.31% CCoAOMT 11 0.29% CNMT 10 0.26% LAMT 9 0.23% CPR 8 0.21% SQS/FDFT1 8 0.21% GGPPS 8 0.21% CYP80B1 7 0.18% XMT_MXMT_DXMT 6 0.16% CYP719 6 0.16% CHI 6 0.16% ROT3/CYP90C1 6 0.16% DET2 6 0.16% ISY 5 0.13% FLS 5 0.13% SQE 5 0.13% MVD 5 0.13% MVK 5 0.13% DXS 5 0.13% BBE 4 0.1% HPPR 4 0.1% SMO1/SMO2 4 0.1% CMK/IspE 4 0.1% HMGR 4 0.1% AACT 4 0.1% TDC 3 0.08% TYDC_DDC 3 0.08% HYD1 3 0.08% MCT/IspD 3 0.08% HMGS 3 0.08% FPPS 3 0.08% 6OMT_4OMT_SOMT 2 0.05% DWF7 2 0.05% CPI1 2 0.05% DXR 2 0.05% IDI 2 0.05% HDR/IspH 2 0.05% CYP80F1 1 0.03% ADC 1 0.03% ODC 1 0.03% DWF5 1 0.03% DWF1 1 0.03% FK 1 0.03% PMK 1 0.03% HDS/IspG 1 0.03% MDS/IspF 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	419	19	BAHD (145)	View species results
Phenylpropanoid pathway	304	12	POD (130)	View species results
Alkaloid pathway	292	23	NMT (50)	View species results
Flavonoid pathway	171	11	UFGT (86)	View species results
Rosmarinic acid pathway	127	7	C4H (66)	View species results
Steroid pathway	106	12	CAS (51)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1634	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	246	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: TRI/TRII

Gene	Pathway	Family	Confidence	Status	Best Target
AedgHiC_scaffold_100043790	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
AedgHiC_scaffold_100051110	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
AedgHiC_scaffold_100051570	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
AedgHiC_scaffold_110059940	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
AedgHiC_scaffold_110062880	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_20082290	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
AedgHiC_scaffold_20082300	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_20082310	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00005__sp_P50162_TRN1_DATST
AedgHiC_scaffold_20096690	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
AedgHiC_scaffold_20099920	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_30107630	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
AedgHiC_scaffold_40141950	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_50159430	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
AedgHiC_scaffold_60207880	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
AedgHiC_scaffold_70212950	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
AedgHiC_scaffold_70227540	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
AedgHiC_scaffold_70228590	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_70228610	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
AedgHiC_scaffold_70230070	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
AedgHiC_scaffold_70230140	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
AedgHiC_scaffold_80252010	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
AedgHiC_scaffold_90264070	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
AedgHiC_scaffold_90267020	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00005__sp_P50162_TRN1_DATST
AedgHiC_scaffold_90277680	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB