PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
Reset
Gene Pathway Family Confidence Status Best Target
AedgHiC_scaffold_100041770 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_100051710 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_100053010 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_10020560 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_10026880 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_10027300 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_110056140 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_110062840 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_20096220 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_20097280 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_20097630 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_40139070 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50165530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50165580 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50173480 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50173490 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50173540 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_50173550 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_60185980 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_60196330 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_60203160 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_60204080 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_80241490 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
AedgHiC_scaffold_80244360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_90258050 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_90259240 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
AedgHiC_scaffold_90261420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL