PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
AedgHiC_scaffold_100036600 Flavonoid 4CL low borderline
AedgHiC_scaffold_100041830 Flavonoid 4CL medium pass
AedgHiC_scaffold_10012940 Flavonoid 4CL medium pass
AedgHiC_scaffold_10017730 Flavonoid 4CL medium pass
AedgHiC_scaffold_10023110 Flavonoid 4CL low borderline
AedgHiC_scaffold_10024670 Flavonoid 4CL medium pass
AedgHiC_scaffold_10028150 Flavonoid 4CL medium pass
AedgHiC_scaffold_110055510 Flavonoid 4CL medium pass
AedgHiC_scaffold_110064970 Flavonoid 4CL low borderline
AedgHiC_scaffold_110066860 Flavonoid 4CL medium pass
AedgHiC_scaffold_110073200 Flavonoid 4CL low borderline
AedgHiC_scaffold_110073480 Flavonoid 4CL medium pass
AedgHiC_scaffold_110073930 Flavonoid 4CL medium pass
AedgHiC_scaffold_20083390 Flavonoid 4CL low borderline
AedgHiC_scaffold_20098070 Flavonoid 4CL low borderline
AedgHiC_scaffold_30109150 Flavonoid 4CL low borderline
AedgHiC_scaffold_30114510 Flavonoid 4CL medium pass
AedgHiC_scaffold_30114520 Flavonoid 4CL medium pass
AedgHiC_scaffold_30114540 Flavonoid 4CL medium pass
AedgHiC_scaffold_30118070 Flavonoid 4CL low borderline
AedgHiC_scaffold_30122190 Flavonoid 4CL medium pass
AedgHiC_scaffold_30122210 Flavonoid 4CL medium pass
AedgHiC_scaffold_40151030 Flavonoid 4CL medium pass
AedgHiC_scaffold_40153210 Flavonoid 4CL medium pass
AedgHiC_scaffold_50161410 Flavonoid 4CL medium pass
AedgHiC_scaffold_50161420 Flavonoid 4CL medium pass
AedgHiC_scaffold_50168840 Flavonoid 4CL medium pass
AedgHiC_scaffold_50170020 Flavonoid 4CL low borderline
AedgHiC_scaffold_50170050 Flavonoid 4CL low borderline
AedgHiC_scaffold_50172540 Flavonoid 4CL low borderline
AedgHiC_scaffold_50179350 Flavonoid 4CL low borderline
AedgHiC_scaffold_60183640 Flavonoid 4CL medium pass
AedgHiC_scaffold_60202540 Flavonoid 4CL medium pass
AedgHiC_scaffold_60202550 Flavonoid 4CL medium pass
AedgHiC_scaffold_60202560 Flavonoid 4CL medium pass
AedgHiC_scaffold_60205850 Flavonoid 4CL medium pass
AedgHiC_scaffold_70214640 Flavonoid 4CL medium pass
AedgHiC_scaffold_70221440 Flavonoid 4CL medium pass
AedgHiC_scaffold_70221450 Flavonoid 4CL medium pass
AedgHiC_scaffold_70221470 Flavonoid 4CL medium pass
AedgHiC_scaffold_70226940 Flavonoid 4CL low borderline
AedgHiC_scaffold_70231110 Flavonoid 4CL medium pass
AedgHiC_scaffold_80240730 Flavonoid 4CL low borderline
AedgHiC_scaffold_90265610 Flavonoid 4CL low borderline
AedgHiC_scaffold_90266060 Flavonoid 4CL medium pass
AedgHiC_scaffold_90271680 Flavonoid 4CL low borderline
AedgHiC_scaffold_90272000 Flavonoid 4CL low borderline
AedgHiC_scaffold_100036600 Phenylpropanoid 4CL low borderline
AedgHiC_scaffold_100041830 Phenylpropanoid 4CL medium pass
AedgHiC_scaffold_10012940 Phenylpropanoid 4CL medium pass