PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
AedgHiC_scaffold_100042340 Alkaloid T16H medium borderline
AedgHiC_scaffold_100052800 Alkaloid T16H medium borderline
AedgHiC_scaffold_10020350 Alkaloid T16H medium borderline
AedgHiC_scaffold_10027760 Alkaloid T16H medium borderline
AedgHiC_scaffold_110056040 Alkaloid T16H medium borderline
AedgHiC_scaffold_110057450 Alkaloid T16H medium borderline
AedgHiC_scaffold_110065150 Alkaloid T16H medium borderline
AedgHiC_scaffold_110065510 Alkaloid T16H low borderline
AedgHiC_scaffold_110068420 Alkaloid T16H medium borderline
AedgHiC_scaffold_110069090 Alkaloid T16H medium borderline
AedgHiC_scaffold_20078050 Alkaloid T16H medium borderline
AedgHiC_scaffold_20080190 Alkaloid T16H medium borderline
AedgHiC_scaffold_20084300 Alkaloid T16H medium borderline
AedgHiC_scaffold_20085640 Alkaloid T16H medium borderline
AedgHiC_scaffold_20090110 Alkaloid T16H low borderline
AedgHiC_scaffold_20090380 Alkaloid T16H medium borderline
AedgHiC_scaffold_20090390 Alkaloid T16H medium borderline
AedgHiC_scaffold_20093090 Alkaloid T16H medium borderline
AedgHiC_scaffold_30105630 Alkaloid T16H medium borderline
AedgHiC_scaffold_30121890 Alkaloid T16H medium borderline
AedgHiC_scaffold_30128200 Alkaloid T16H medium borderline
AedgHiC_scaffold_30128210 Alkaloid T16H medium borderline
AedgHiC_scaffold_40145060 Alkaloid T16H medium borderline
AedgHiC_scaffold_40145090 Alkaloid T16H medium borderline
AedgHiC_scaffold_40147990 Alkaloid T16H medium borderline
AedgHiC_scaffold_40150250 Alkaloid T16H medium borderline
AedgHiC_scaffold_40151120 Alkaloid T16H low borderline
AedgHiC_scaffold_50157820 Alkaloid T16H medium borderline
AedgHiC_scaffold_50168260 Alkaloid T16H medium borderline
AedgHiC_scaffold_60183150 Alkaloid T16H medium borderline
AedgHiC_scaffold_60196450 Alkaloid T16H medium borderline
AedgHiC_scaffold_70210600 Alkaloid T16H medium borderline
AedgHiC_scaffold_70210610 Alkaloid T16H medium borderline
AedgHiC_scaffold_70214290 Alkaloid T16H medium borderline
AedgHiC_scaffold_80244820 Alkaloid T16H medium borderline
AedgHiC_scaffold_80255220 Alkaloid T16H medium borderline
AedgHiC_scaffold_90266090 Alkaloid T16H medium borderline