PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
AedgHiC_scaffold_100041480 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_100043700 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_100045620 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_100054510 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_100055360 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_10017640 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_110056340 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_110066000 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_110067760 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_110067930 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_20075630 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_20087000 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_20098360 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_20100420 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_20100450 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_30123780 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_30124190 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_40151430 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_50171760 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_50178120 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_60202910 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_70229110 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_70229570 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_70233470 Phenylpropanoid HCT low borderline
AedgHiC_scaffold_80252440 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_90268360 Phenylpropanoid HCT medium pass
AedgHiC_scaffold_90274000 Phenylpropanoid HCT low borderline