Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.53% Phenylpropanoid pathway 21.42% Alkaloid pathway 20.58% Flavonoid pathway 12.05% Rosmarinic acid pathway 8.95% Steroid pathway 7.47%

Family Distribution

1419 Candidate Genes

C4H 7.05% C3'H/CYP98A 6.5% BAHD 5.05% T3O 4.24% CYP76 4.21% UGT 4.03% IFS 3.85% POD 3.8%

Other Families 61.27%

More Families (98)

4CL 141 3.67% 7DLGT 123 3.2% DWF4/CYP90B1 115 2.99% UFGT 105 2.73% F3'H/CYP75B 101 2.63% F3H 96 2.5% NMT 89 2.31% CYP71 69 1.79% BR6OX2/CYP85A2 63 1.64% CODM/T6ODM 62 1.61% SMT1/SMT2/SMT3 62 1.61% CAS 60 1.56% STR 57 1.48% H6H 56 1.46% COMT 46 1.2% CYP90D1 45 1.17% TPS 45 1.17% LAC 42 1.09% IFR 39 1.01% T16H 37 0.96% SGD 36 0.94% GES 36 0.94% CAD 34 0.88% PYKS 33 0.86% 16OMT 31 0.81% PMT 28 0.73% F5H/CYP84A 28 0.73% IO 27 0.7% HCT 27 0.7% CSE 27 0.7% RAS 25 0.65% TRI/TRII 24 0.62% 7DLH 23 0.6% ANS/LDOX 23 0.6% COR 22 0.57% G8O/G8H 22 0.57% F3'5'H/CYP75A 22 0.57% CCR 21 0.55% NCS 20 0.52% GS 20 0.52% FNS 20 0.52% PAL 18 0.47% CYP51G1 18 0.47% CPD/CYP90A1 18 0.47% BR6OX1/CYP85A1 17 0.44% ANR 16 0.42% SLS 15 0.39% CHS 15 0.39% MPO 14 0.36% 8HGO 13 0.34% TAT 13 0.34% DFR 12 0.31% CCoAOMT 11 0.29% CNMT 10 0.26% LAMT 9 0.23% CPR 8 0.21% SQS/FDFT1 8 0.21% GGPPS 8 0.21% CYP80B1 7 0.18% XMT_MXMT_DXMT 6 0.16% CYP719 6 0.16% CHI 6 0.16% ROT3/CYP90C1 6 0.16% DET2 6 0.16% ISY 5 0.13% FLS 5 0.13% SQE 5 0.13% MVD 5 0.13% MVK 5 0.13% DXS 5 0.13% BBE 4 0.1% HPPR 4 0.1% SMO1/SMO2 4 0.1% CMK/IspE 4 0.1% HMGR 4 0.1% AACT 4 0.1% TDC 3 0.08% TYDC_DDC 3 0.08% HYD1 3 0.08% MCT/IspD 3 0.08% HMGS 3 0.08% FPPS 3 0.08% 6OMT_4OMT_SOMT 2 0.05% DWF7 2 0.05% CPI1 2 0.05% DXR 2 0.05% IDI 2 0.05% HDR/IspH 2 0.05% CYP80F1 1 0.03% ADC 1 0.03% ODC 1 0.03% DWF5 1 0.03% DWF1 1 0.03% FK 1 0.03% PMK 1 0.03% HDS/IspG 1 0.03% MDS/IspF 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	419	19	BAHD (145)	View species results
Phenylpropanoid pathway	304	12	POD (130)	View species results
Alkaloid pathway	292	23	NMT (50)	View species results
Flavonoid pathway	171	11	UFGT (86)	View species results
Rosmarinic acid pathway	127	7	C4H (66)	View species results
Steroid pathway	106	12	CAS (51)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1634	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	246	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CCR

Gene	Pathway	Family	Confidence	Status	Best Target
AedgHiC_scaffold_10017520	Phenylpropanoid	CCR	medium	borderline	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_110056430	Phenylpropanoid	CCR	medium	pass	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_110056440	Phenylpropanoid	CCR	medium	pass	CCR__00004__sp_G7JEE5_CCR2_MEDTR
AedgHiC_scaffold_110063220	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
AedgHiC_scaffold_110063230	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
AedgHiC_scaffold_20075850	Phenylpropanoid	CCR	medium	borderline	CCR__00004__sp_G7JEE5_CCR2_MEDTR
AedgHiC_scaffold_20076050	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
AedgHiC_scaffold_20101600	Phenylpropanoid	CCR	medium	pass	CCR__00001__sp_A0A059TC02_CCR1_PETHY
AedgHiC_scaffold_20101610	Phenylpropanoid	CCR	medium	pass	CCR__00001__sp_A0A059TC02_CCR1_PETHY
AedgHiC_scaffold_30109480	Phenylpropanoid	CCR	low	borderline	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_30110610	Phenylpropanoid	CCR	medium	pass	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_30110620	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
AedgHiC_scaffold_40146520	Phenylpropanoid	CCR	low	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
AedgHiC_scaffold_40151590	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
AedgHiC_scaffold_60184270	Phenylpropanoid	CCR	medium	pass	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_60186690	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
AedgHiC_scaffold_70233850	Phenylpropanoid	CCR	medium	pass	CCR__00007__sp_Q9CA28_TKPR2_ARATH
AedgHiC_scaffold_80245640	Phenylpropanoid	CCR	medium	pass	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
AedgHiC_scaffold_80255980	Phenylpropanoid	CCR	medium	pass	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
AedgHiC_scaffold_90260050	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
AedgHiC_scaffold_90265140	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY