PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
solanum_aethiopicum_Soaet10039142 solanum_aethiopicum solanum_aethiopicum_Soaet10039142
solanum_galapagense_GWHPBJTJ030617 solanum_galapagense solanum_galapagense_GWHPBJTJ030617
solanum_habrochaites_GWHPBJTH030766 solanum_habrochaites solanum_habrochaites_GWHPBJTH030766
solanum_lycopersicoides_Solyd08g073410.1 solanum_lycopersicoides solanum_lycopersicoides_Solyd08g073410.1
solanum_lycopersicoides_Solyd09g062660.1 solanum_lycopersicoides solanum_lycopersicoides_Solyd09g062660.1
Slyc08G0023390.1 solanum_lycopersicum Slyc08G0023390.1
Smel03G0000880.1 solanum_melongena Smel03G0000880.1
Smel08G0000010.1 solanum_melongena Smel08G0000010.1
SOpen08G0028880.1 solanum_pennellii SOpen08G0028880.1
solanum_pimpinellifolium_SPIMP08g0257080 solanum_pimpinellifolium solanum_pimpinellifolium_SPIMP08g0257080
solanum_rostratum_evm.model.Chr8.173 solanum_rostratum solanum_rostratum_evm.model.Chr8.173
solanum_sitiens_g5677.t1 solanum_sitiens solanum_sitiens_g5677.t1
solanum_stenotomum_XP_049377482.1 solanum_stenotomum solanum_stenotomum_XP_049377482.1
sonneratia_alba_SA_04264 sonneratia_alba sonneratia_alba_SA_04264
sonneratia_alba_SA_07274 sonneratia_alba sonneratia_alba_SA_07274
sonneratia_caseolaris_Sc2_23314 sonneratia_caseolaris sonneratia_caseolaris_Sc2_23314
sonneratia_caseolaris_Sc2_27783 sonneratia_caseolaris sonneratia_caseolaris_Sc2_27783
Sbic04G0029500.1 sorghum_bicolor Sbic04G0029500.1
sparganium_stoloniferum_evm.model.Chr8.449 sparganium_stoloniferum sparganium_stoloniferum_evm.model.Chr8.449
TKY70973.1 spatholobus_suberectus TKY70973.1
speranskia_yunnanensis_evm.model.ctg000620_np1212.1897 speranskia_yunnanensis speranskia_yunnanensis_evm.model.ctg000620_np1212.1897
Sdon697150098400 sphaerocarpos_donnellii Sdon697150098400
Sgircontig_6480232590 sphagnum_girgensohnii Sgircontig_6480232590
Sgircontig_7620277370 sphagnum_girgensohnii Sgircontig_7620277370
Sgircontig_8300294280 sphagnum_girgensohnii Sgircontig_8300294280
Spal3555620271920 sphagnum_palustre Spal3555620271920
Sole05G0020440 spinacia_oleracea Sole05G0020440
Sole06G0012020 spinacia_oleracea Sole06G0012020
spirodela_intermedia_CAA7403788.1 spirodela_intermedia spirodela_intermedia_CAA7403788.1
Spolpseudo110039190.1 spirodela_polyrhiza Spolpseudo110039190.1