PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
SAchi11G0008310.1 saururus_chinensis SAchi11G0008310.1
scalesia_atractyloides_maker-chr_24-snap-gene-64.24-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_24-snap-gene-64.24-mRNA-1
scalesia_atractyloides_maker-chr_26-augustus-gene-805.2-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_26-augustus-gene-805.2-mRNA-1
Scapania2459380262580 scapania Scapania2459380262580
Snep2459380262580 scapania_nepalensis Snep2459380262580
Scup1096820000250 schistidium_cupulare Scup1096820000250
Scup1821080082580 schistidium_cupulare Scup1821080082580
SCpencontig_101440001670 schistostega_pennata SCpencontig_101440001670
schrenkiella_parvula_Sp2g00720.1 schrenkiella_parvula schrenkiella_parvula_Sp2g00720.1
Sbirscaffold184_cov3390045700 sclerocarya_birrea Sbirscaffold184_cov3390045700
scurrula_parasitica_var._graciliflora_SPA10667 scurrula_parasitica_var_graciliflora scurrula_parasitica_var._graciliflora_SPA10667
scutellaria_barbata_GWHPAOTP010829 scutellaria_barbata scutellaria_barbata_GWHPAOTP010829
scutellaria_barbata_GWHPAOTP031400 scutellaria_barbata scutellaria_barbata_GWHPAOTP031400
Scer06G0020180.1 secale_cereale Scer06G0020180.1
Smoescaffold_110033030.1 selaginella_moellendorffii Smoescaffold_110033030.1
XP_011073285.1 sesamum_indicum XP_011073285.1
XP_011080906.1 sesamum_indicum XP_011080906.1
Sitascaffold_10027260.1 setaria_italica Sitascaffold_10027260.1
Sitascaffold_50202660.1 setaria_italica Sitascaffold_50202660.1
Svir01G0030540.1 setaria_viridis Svir01G0030540.1
Svir05G0051360.1 setaria_viridis Svir05G0051360.1
silene_latifolia_GWHPCBIJ017845 silene_latifolia silene_latifolia_GWHPCBIJ017845
SIchi01G0009830.1 simmondsia_chinensis SIchi01G0009830.1
SalbSina_scaffold22770183440.1 sinapis_alba SalbSina_scaffold22770183440.1
SalbSina_scaffold8040452740.1 sinapis_alba SalbSina_scaffold8040452740.1
SalbSina_scaffold920482290.1 sinapis_alba SalbSina_scaffold920482290.1
evm.TU.tig00153490.16_1_ORF1 siraitia_grosvenorii evm.TU.tig00153490.16_1_ORF1
SiriSI_scaffold1460151040 sisymbrium_irio SiriSI_scaffold1460151040
SiriSI_scaffold29220344070 sisymbrium_irio SiriSI_scaffold29220344070
solanum_aethiopicum_Soaet10039141 solanum_aethiopicum solanum_aethiopicum_Soaet10039141