PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
SIchi01G0002140.1 Alkaloid 16OMT medium borderline
SIchi01G0010910.1 Alkaloid 16OMT medium borderline
SIchi01G0010910.2 Alkaloid 16OMT medium borderline
SIchi02G0001380.1 Alkaloid 16OMT medium borderline
SIchi04G0001200.1 Alkaloid 16OMT medium borderline
SIchi04G0001200.2 Alkaloid 16OMT medium borderline
SIchi04G0003420.6 Alkaloid 16OMT medium borderline
SIchi06G0007020.1 Alkaloid 16OMT medium borderline
SIchi06G0007030.1 Alkaloid 16OMT medium borderline
SIchi06G0007030.2 Alkaloid 16OMT medium borderline
SIchi06G0007030.3 Alkaloid 16OMT medium borderline
SIchi06G0007040.1 Alkaloid 16OMT medium borderline
SIchi06G0007060.1 Alkaloid 16OMT medium borderline
SIchi06G0007070.1 Alkaloid 16OMT medium borderline
SIchi06G0007070.2 Alkaloid 16OMT medium borderline
SIchi06G0007080.1 Alkaloid 16OMT medium borderline
SIchi06G0007080.2 Alkaloid 16OMT medium borderline
SIchi06G0007080.3 Alkaloid 16OMT medium borderline
SIchi06G0007080.4 Alkaloid 16OMT medium borderline
SIchi06G0007090.1 Alkaloid 16OMT medium borderline
SIchi06G0007100.1 Alkaloid 16OMT medium borderline
SIchi06G0009230.1 Alkaloid 16OMT medium borderline
SIchi09G0005760.1 Alkaloid 16OMT medium borderline
SIchi09G0005770.1 Alkaloid 16OMT medium borderline
SIchi10G0005240.1 Alkaloid 16OMT medium borderline
SIchi12G0002870.1 Alkaloid 16OMT medium borderline
SIchi13G0010500.1 Alkaloid 16OMT medium borderline
SIchi15G0002780.1 Alkaloid 16OMT medium borderline
SIchi15G0004540.1 Alkaloid 16OMT low borderline
SIchi23G0001690.1 Alkaloid 16OMT medium borderline
SIchi23G0001720.1 Alkaloid 16OMT medium borderline
SIchi23G0001740.1 Alkaloid 16OMT medium borderline
SIchi25G0000520.1 Alkaloid 16OMT medium borderline
SIchi26G0000290.1 Alkaloid 16OMT medium borderline
SIchi26G0000320.1 Alkaloid 16OMT medium borderline
SIchi26G0000530.1 Alkaloid 16OMT medium borderline
SIchi26G0000590.1 Alkaloid 16OMT medium borderline
SIchi26G0000600.1 Alkaloid 16OMT medium borderline
SIchi26G0001820.1 Alkaloid 16OMT medium borderline
SIchi26G0001870.1 Alkaloid 16OMT medium borderline
SIchi26G0001890.1 Alkaloid 16OMT medium borderline
SIchi06G0007050.1 Alkaloid 6OMT_4OMT_SOMT medium pass
SIchi18G0006150.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
SIchi01G0000400.1 Alkaloid 7DLGT high pass
SIchi01G0000410.1 Alkaloid 7DLGT high pass
SIchi01G0000530.1 Alkaloid 7DLGT high pass
SIchi01G0000550.1 Alkaloid 7DLGT high pass
SIchi01G0000590.1 Alkaloid 7DLGT high pass
SIchi01G0000610.1 Alkaloid 7DLGT medium pass
SIchi01G0000620.1 Alkaloid 7DLGT medium pass