PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
SIchi01G0006290.2 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0006290.4 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0007670.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0007670.2 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0007670.4 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0007670.5 Steroid BR6OX1/CYP85A1 medium borderline
SIchi04G0001240.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi04G0001300.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi11G0000860.1 Steroid BR6OX1/CYP85A1 low borderline
SIchi11G0000860.2 Steroid BR6OX1/CYP85A1 low borderline
SIchi11G0000860.3 Steroid BR6OX1/CYP85A1 low borderline
SIchi12G0001310.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi12G0001310.2 Steroid BR6OX1/CYP85A1 medium borderline
SIchi15G0006130.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi15G0006540.1 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.2 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.3 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.4 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.5 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.6 Steroid BR6OX1/CYP85A1 low borderline
SIchi15G0006540.7 Steroid BR6OX1/CYP85A1 low borderline
SIchi22G0000620.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi26G0003740.1 Steroid BR6OX1/CYP85A1 medium borderline
SIchi01G0002360.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi01G0002630.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi01G0006310.1 Steroid BR6OX2/CYP85A2 medium borderline
SIchi01G0009650.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi01G0010710.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0002010.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0007670.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0007670.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0009400.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0009400.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi03G0001780.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi03G0004350.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi03G0010820.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi03G0011110.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi04G0001320.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi04G0001340.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi04G0001470.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi04G0004270.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi06G0000990.3 Steroid BR6OX2/CYP85A2 low borderline
SIchi06G0006840.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi06G0008060.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi06G0008110.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi06G0010100.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi07G0001550.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi10G0006730.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi10G0007920.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi11G0006210.1 Steroid BR6OX2/CYP85A2 low borderline