PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
SIchi03G0011470.1 Terpenoid AACT medium borderline
SIchi03G0011470.2 Terpenoid AACT medium borderline
SIchi03G0011470.3 Terpenoid AACT medium borderline
SIchi05G0001000.1 Terpenoid AACT low borderline
SIchi13G0000020.1 Terpenoid AACT medium borderline
SIchi17G0002550.1 Terpenoid AACT medium borderline
SIchi17G0002550.2 Terpenoid AACT medium borderline
SIchi17G0002550.3 Terpenoid AACT medium borderline
SIchi20G0005080.1 Terpenoid AACT low borderline
SIchi20G0005080.2 Terpenoid AACT low borderline
SIchi21G0000590.1 Terpenoid AACT medium borderline
SIchi21G0000590.2 Terpenoid AACT medium borderline
SIchi21G0000590.3 Terpenoid AACT medium borderline
SIchi21G0000590.4 Terpenoid AACT medium borderline
SIchi21G0000590.5 Terpenoid AACT medium borderline
SIchi22G0000020.1 Terpenoid AACT medium borderline
SIchi22G0000020.2 Terpenoid AACT medium borderline
SIchi22G0000020.3 Terpenoid AACT medium borderline
SIchi22G0000020.4 Terpenoid AACT medium borderline
SIchi22G0000020.5 Terpenoid AACT medium borderline
SIchi01G0002300.1 Terpenoid BAHD medium pass
SIchi01G0002300.2 Terpenoid BAHD medium pass
SIchi01G0003480.1 Terpenoid BAHD medium pass
SIchi01G0004450.1 Terpenoid BAHD medium pass
SIchi01G0004450.2 Terpenoid BAHD medium pass
SIchi01G0004450.3 Terpenoid BAHD medium pass
SIchi01G0006620.1 Terpenoid BAHD medium pass
SIchi01G0006680.1 Terpenoid BAHD medium pass
SIchi01G0007150.1 Terpenoid BAHD medium pass
SIchi01G0007150.2 Terpenoid BAHD medium pass
SIchi01G0007840.1 Terpenoid BAHD medium pass
SIchi01G0009090.1 Terpenoid BAHD medium pass
SIchi01G0010740.1 Terpenoid BAHD low borderline
SIchi02G0002290.1 Terpenoid BAHD medium pass
SIchi02G0002290.2 Terpenoid BAHD medium pass
SIchi02G0002290.3 Terpenoid BAHD medium pass
SIchi02G0002290.4 Terpenoid BAHD medium pass
SIchi02G0003870.1 Terpenoid BAHD medium pass
SIchi02G0003870.2 Terpenoid BAHD medium pass
SIchi02G0004400.1 Terpenoid BAHD low borderline
SIchi02G0006420.1 Terpenoid BAHD medium pass
SIchi02G0006420.2 Terpenoid BAHD medium pass
SIchi02G0006550.1 Terpenoid BAHD medium pass
SIchi02G0007300.1 Terpenoid BAHD low borderline
SIchi02G0007330.1 Terpenoid BAHD low borderline
SIchi02G0007990.1 Terpenoid BAHD medium pass
SIchi02G0008000.1 Terpenoid BAHD medium pass
SIchi02G0008020.1 Terpenoid BAHD medium pass
SIchi02G0008020.2 Terpenoid BAHD medium pass
SIchi02G0008030.1 Terpenoid BAHD medium pass