PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
SIchi01G0003850.1 Flavonoid IFR low borderline
SIchi01G0007160.1 Flavonoid IFR low borderline
SIchi01G0007160.2 Flavonoid IFR low borderline
SIchi01G0008640.1 Flavonoid IFR low borderline
SIchi01G0008640.2 Flavonoid IFR low borderline
SIchi02G0005960.1 Flavonoid IFR high pass
SIchi02G0005960.2 Flavonoid IFR high pass
SIchi04G0006740.1 Flavonoid IFR high pass
SIchi04G0006740.2 Flavonoid IFR high pass
SIchi04G0006740.3 Flavonoid IFR high pass
SIchi04G0006740.4 Flavonoid IFR high pass
SIchi05G0002850.1 Flavonoid IFR low borderline
SIchi05G0003860.1 Flavonoid IFR low borderline
SIchi05G0006390.1 Flavonoid IFR low borderline
SIchi05G0006390.2 Flavonoid IFR low borderline
SIchi05G0006390.3 Flavonoid IFR low borderline
SIchi05G0006390.4 Flavonoid IFR low borderline
SIchi05G0006870.1 Flavonoid IFR low borderline
SIchi05G0006870.2 Flavonoid IFR low borderline
SIchi05G0006870.3 Flavonoid IFR low borderline
SIchi06G0004660.1 Flavonoid IFR low borderline
SIchi07G0008490.1 Flavonoid IFR high pass
SIchi08G0005680.5 Flavonoid IFR low borderline
SIchi08G0005680.6 Flavonoid IFR low borderline
SIchi09G0002550.1 Flavonoid IFR low borderline
SIchi09G0002550.2 Flavonoid IFR low borderline
SIchi09G0002550.3 Flavonoid IFR low borderline
SIchi09G0003900.1 Flavonoid IFR low borderline
SIchi09G0003900.2 Flavonoid IFR low borderline
SIchi09G0003900.3 Flavonoid IFR low borderline
SIchi09G0010820.1 Flavonoid IFR low borderline
SIchi09G0010820.2 Flavonoid IFR low borderline
SIchi12G0003900.1 Flavonoid IFR low borderline
SIchi14G0001770.1 Flavonoid IFR low borderline
SIchi14G0001770.2 Flavonoid IFR low borderline
SIchi14G0001770.3 Flavonoid IFR low borderline
SIchi14G0002380.1 Flavonoid IFR medium pass
SIchi14G0002380.2 Flavonoid IFR medium pass
SIchi14G0002380.3 Flavonoid IFR medium pass
SIchi15G0001160.1 Flavonoid IFR low borderline
SIchi15G0001160.2 Flavonoid IFR low borderline
SIchi15G0001160.3 Flavonoid IFR low borderline
SIchi18G0004390.1 Flavonoid IFR high pass
SIchi18G0004400.1 Flavonoid IFR high pass
SIchi18G0004400.2 Flavonoid IFR high pass
SIchi18G0004400.3 Flavonoid IFR high pass
SIchi18G0004410.1 Flavonoid IFR high pass
SIchi18G0005390.1 Flavonoid IFR low borderline
SIchi18G0005390.2 Flavonoid IFR low borderline
SIchi20G0005000.1 Flavonoid IFR low borderline