PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
SIchi02G0005290.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi02G0005290.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi02G0005480.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi02G0005480.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi02G0007510.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi02G0009240.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi03G0001830.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi03G0001830.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi05G0003840.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi05G0003840.2 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi05G0007060.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi07G0005280.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi08G0000720.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi08G0000720.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi08G0008910.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi09G0006410.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi10G0007160.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi10G0007230.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi10G0007560.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi10G0009010.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi14G0002980.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi14G0006530.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi14G0006530.3 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SIchi14G0007710.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi14G0007720.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi14G0007950.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi15G0005890.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi17G0005770.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi18G0005160.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi21G0003350.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SIchi22G0004220.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL