PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
SIchi01G0007840.1 Rosmarinic Acid RAS low borderline
SIchi03G0003690.1 Rosmarinic Acid RAS low borderline
SIchi03G0003690.2 Rosmarinic Acid RAS low borderline
SIchi03G0003690.3 Rosmarinic Acid RAS low borderline
SIchi04G0000450.1 Rosmarinic Acid RAS medium pass
SIchi04G0001980.1 Rosmarinic Acid RAS low borderline
SIchi04G0001980.2 Rosmarinic Acid RAS low borderline
SIchi07G0001090.1 Rosmarinic Acid RAS low borderline
SIchi08G0002970.1 Rosmarinic Acid RAS low borderline
SIchi08G0002970.2 Rosmarinic Acid RAS low borderline
SIchi08G0007120.1 Rosmarinic Acid RAS medium pass
SIchi08G0007660.1 Rosmarinic Acid RAS low borderline
SIchi09G0009890.1 Rosmarinic Acid RAS medium pass
SIchi11G0005180.1 Rosmarinic Acid RAS medium pass
SIchi11G0007670.1 Rosmarinic Acid RAS low borderline
SIchi12G0008180.1 Rosmarinic Acid RAS medium pass
SIchi12G0008180.2 Rosmarinic Acid RAS medium pass
SIchi13G0002080.1 Rosmarinic Acid RAS low borderline
SIchi15G0003910.1 Rosmarinic Acid RAS medium pass
SIchi15G0003920.1 Rosmarinic Acid RAS medium pass
SIchi15G0004810.1 Rosmarinic Acid RAS low borderline
SIchi15G0004810.2 Rosmarinic Acid RAS low borderline
SIchi15G0007130.1 Rosmarinic Acid RAS low borderline
SIchi18G0005510.1 Rosmarinic Acid RAS medium pass
SIchi21G0001700.1 Rosmarinic Acid RAS medium pass
SIchi21G0001800.1 Rosmarinic Acid RAS medium pass
SIchi21G0004280.1 Rosmarinic Acid RAS medium pass
SIchi21G0004560.1 Rosmarinic Acid RAS low borderline
SIchi26G0003400.1 Rosmarinic Acid RAS low borderline