PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
SIchi01G0002630.1 Alkaloid T16H medium borderline
SIchi01G0006290.2 Alkaloid T16H low borderline
SIchi01G0007670.5 Alkaloid T16H low borderline
SIchi03G0001900.4 Alkaloid T16H medium borderline
SIchi03G0004360.1 Alkaloid T16H low borderline
SIchi04G0001290.1 Alkaloid T16H medium borderline
SIchi04G0001300.1 Alkaloid T16H medium borderline
SIchi04G0001450.1 Alkaloid T16H medium borderline
SIchi04G0001460.1 Alkaloid T16H medium borderline
SIchi06G0008060.1 Alkaloid T16H medium borderline
SIchi06G0008110.1 Alkaloid T16H medium borderline
SIchi06G0010100.2 Alkaloid T16H medium borderline
SIchi07G0001560.1 Alkaloid T16H low borderline
SIchi11G0000060.1 Alkaloid T16H medium borderline
SIchi11G0004290.1 Alkaloid T16H medium borderline
SIchi14G0000870.1 Alkaloid T16H medium borderline
SIchi14G0000880.1 Alkaloid T16H medium borderline
SIchi15G0003480.1 Alkaloid T16H medium borderline
SIchi15G0006540.1 Alkaloid T16H medium borderline
SIchi15G0006540.2 Alkaloid T16H medium borderline
SIchi15G0006540.3 Alkaloid T16H medium borderline
SIchi15G0006540.4 Alkaloid T16H medium borderline
SIchi15G0006540.5 Alkaloid T16H medium borderline
SIchi15G0006540.6 Alkaloid T16H medium borderline
SIchi15G0006540.7 Alkaloid T16H medium borderline
SIchi17G0002030.1 Alkaloid T16H medium borderline
SIchi25G0005520.1 Alkaloid T16H low borderline
SIchi26G0003730.1 Alkaloid T16H medium borderline
SIchi26G0003760.1 Alkaloid T16H low borderline
SIchi26G0003790.1 Alkaloid T16H medium borderline
SIchi26G0003810.1 Alkaloid T16H low borderline
SIchi26G0003820.1 Alkaloid T16H low borderline
SIchi26G0003850.1 Alkaloid T16H low borderline
SIchi26G0003890.1 Alkaloid T16H low borderline
SIchi26G0003960.1 Alkaloid T16H low borderline