PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
SIchi01G0006680.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi01G0007840.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi03G0006250.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi03G0006250.2 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi04G0000450.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi07G0009110.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi08G0007120.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi09G0009890.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi10G0002190.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi11G0005180.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi12G0008180.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi12G0008180.2 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi15G0003910.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi15G0003920.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi15G0003950.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi18G0005510.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SIchi19G0005100.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi21G0000290.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi21G0000940.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi21G0001700.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SIchi21G0001800.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
SIchi21G0004280.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
SIchi24G0003940.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi25G0005810.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
SIchi26G0003420.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH