PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
SIchi03G0002260.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
SIchi03G0002270.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi06G0004870.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
SIchi06G0010470.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi06G0010470.2 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi09G0001210.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
SIchi10G0004810.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi11G0005400.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi11G0007300.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi11G0007870.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi11G0007890.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi12G0000830.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi12G0000830.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi12G0000830.3 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi12G0001980.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi15G0003180.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi15G0003190.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi16G0010780.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
SIchi16G0010780.2 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
SIchi20G0005370.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi21G0005280.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi21G0005950.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SIchi22G0004490.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
SIchi23G0002010.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SIchi25G0004570.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.2 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.3 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.4 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.5 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.6 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.7 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.8 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SIchi25G0004570.9 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH