PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
SIchi11G0006210.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi11G0006210.3 Steroid BR6OX2/CYP85A2 low borderline
SIchi11G0006210.4 Steroid BR6OX2/CYP85A2 low borderline
SIchi11G0006210.5 Steroid BR6OX2/CYP85A2 low borderline
SIchi13G0000900.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi13G0001880.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi14G0000870.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi14G0004260.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi14G0005560.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi14G0007910.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi14G0007910.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0003470.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0003480.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0003500.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0003520.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0003520.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0006630.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi15G0006640.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi16G0007840.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi16G0007890.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi18G0000840.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi19G0000080.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi19G0007970.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi20G0001210.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi20G0001270.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi20G0004870.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi21G0006240.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi21G0006240.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi22G0004470.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi23G0001930.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi25G0005510.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0002380.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003800.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003830.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003840.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003860.1 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003860.2 Steroid BR6OX2/CYP85A2 low borderline
SIchi26G0003860.3 Steroid BR6OX2/CYP85A2 low borderline
SIchi02G0003500.1 Steroid CAS medium pass
SIchi03G0009220.1 Steroid CAS low borderline
SIchi03G0009220.2 Steroid CAS low borderline
SIchi03G0009220.3 Steroid CAS low borderline
SIchi03G0009230.1 Steroid CAS low borderline
SIchi03G0009240.1 Steroid CAS medium pass
SIchi03G0009260.1 Steroid CAS medium pass
SIchi03G0009280.1 Steroid CAS low borderline
SIchi03G0009280.2 Steroid CAS low borderline
SIchi03G0009280.3 Steroid CAS low borderline
SIchi03G0009280.4 Steroid CAS medium pass
SIchi03G0009330.1 Steroid CAS low borderline