PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ002189 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ002863 Alkaloid 16OMT low borderline
silene_latifolia_GWHPCBIJ003764 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ004122 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ004123 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ004124 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ004126 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006707 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006940 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006992 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006993 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006996 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006997 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006998 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ006999 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ007000 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ011754 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ015314 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ015315 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ015316 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ018688 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ020491 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ029697 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ033192 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ036330 Alkaloid 16OMT medium borderline
silene_latifolia_GWHPCBIJ015317 Alkaloid 6OMT_4OMT_SOMT medium pass
silene_latifolia_GWHPCBIJ000575 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ001645 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ001954 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ002329 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ002338 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ002375 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ002678 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ002679 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ002822 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ002824 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ002959 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ003226 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ003228 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ003470 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ004878 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ005057 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ005087 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ005224 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ005460 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ005711 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ005802 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ006157 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ006340 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ006461 Alkaloid 7DLGT low borderline