PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ003139 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ003230 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ004726 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ009508 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ009805 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ011900 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ011901 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ013574 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ013589 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ017966 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ017967 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ017968 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ020555 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ022687 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ022690 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ022705 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ025233 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ026236 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ026812 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ030951 Steroid BR6OX1/CYP85A1 low borderline
silene_latifolia_GWHPCBIJ036122 Steroid BR6OX1/CYP85A1 medium borderline
silene_latifolia_GWHPCBIJ000017 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ000224 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ000454 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ000929 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ002823 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ002826 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ003229 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ005484 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ005572 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ005905 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ006486 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ007146 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ007147 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ007558 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ007601 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ007657 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ008415 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ009372 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ009685 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ011683 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ011899 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012693 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012719 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012931 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012989 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012990 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012991 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012992 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ012993 Steroid BR6OX2/CYP85A2 low borderline