PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000208 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000209 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000210 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000933 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ003960 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ003961 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ005878 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ006400 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ006402 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ007726 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ007728 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ007729 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ007733 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ007735 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ010839 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ012592 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ013299 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ014992 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ015569 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ015611 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ015612 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ015613 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ015614 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ018821 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ021299 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ023951 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ025418 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ025419 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ025421 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ025650 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ027637 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ028876 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ029179 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ029180 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ029300 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ029305 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ030269 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ030650 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ030651 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ030652 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ030654 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ031906 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ031967 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ033682 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ035702 Alkaloid PMT low borderline
silene_latifolia_GWHPCBIJ035703 Alkaloid PMT low borderline