PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
silene_latifolia_GWHPCBIJ000679 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ003062 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ004979 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ007681 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ007787 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ010820 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ011684 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ012206 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ014330 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ015554 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ016710 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ021403 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ022491 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ023683 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ024702 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ025064 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ025302 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ026364 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ026767 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ026769 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027389 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027397 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027781 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027785 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027787 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027877 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027882 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ027985 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ028060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ028062 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ028064 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ028216 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ029901 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
silene_latifolia_GWHPCBIJ030480 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ030598 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ030916 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ030917 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ035334 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ035335 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ035818 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ037167 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
silene_latifolia_GWHPCBIJ037462 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL