PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000565 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ000567 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ001780 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ002323 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ004706 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006051 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006054 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006056 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ007822 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ010184 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010213 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010215 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010221 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010225 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010437 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011428 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011429 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011430 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011433 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011434 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011435 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011502 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ012780 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ013186 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ013488 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ016119 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ021695 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ022383 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ022996 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ023543 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ023577 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ024076 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025300 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025459 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025460 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025461 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025462 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025463 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025464 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ027588 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027589 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027593 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027594 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027598 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027599 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027687 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ028044 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ028045 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ029251 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ030281 Phenylpropanoid CAD low borderline