PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000748 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ001196 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ001961 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ002754 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ002755 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ003767 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ004329 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ004808 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ006590 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ007881 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ007897 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ009873 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ010186 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ011403 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ012030 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ012872 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ012873 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ012886 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ012887 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ014712 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ014937 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ016651 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ017087 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ017911 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ019380 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ020350 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ020408 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ020409 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ020613 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ021446 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ022972 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ023488 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ025885 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ026853 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ027158 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ028835 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ030003 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ030636 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ030637 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ030656 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ030875 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ032105 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ032619 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ032640 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ034625 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ036281 Phenylpropanoid 4CL medium pass
silene_latifolia_GWHPCBIJ036454 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ036668 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ037414 Phenylpropanoid 4CL low borderline
silene_latifolia_GWHPCBIJ000017 Phenylpropanoid C3'H/CYP98A low borderline