PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000841 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ004584 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ007863 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ009235 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ009609 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009610 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009611 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009612 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009613 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009614 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009616 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009619 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009623 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009624 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009641 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009644 Alkaloid PYKS medium pass
silene_latifolia_GWHPCBIJ009645 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009646 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ009754 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ011174 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ012198 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ012515 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ016228 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ017557 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ020668 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ021071 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ021868 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ022375 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ022378 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ022833 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ024051 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ024515 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ025699 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027129 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027133 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027136 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027137 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027139 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027141 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027143 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ027145 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ028853 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ028854 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ028985 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ029319 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ029978 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ030187 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ031082 Alkaloid PYKS low borderline
silene_latifolia_GWHPCBIJ031370 Alkaloid PYKS high pass
silene_latifolia_GWHPCBIJ034962 Alkaloid PYKS low borderline