PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
silene_latifolia_GWHPCBIJ000060 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ001470 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ001668 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
silene_latifolia_GWHPCBIJ001670 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ001947 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ003353 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
silene_latifolia_GWHPCBIJ003775 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ004521 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ004664 Alkaloid TRI/TRII low borderline TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
silene_latifolia_GWHPCBIJ007876 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
silene_latifolia_GWHPCBIJ008300 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ009662 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
silene_latifolia_GWHPCBIJ009664 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
silene_latifolia_GWHPCBIJ009820 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
silene_latifolia_GWHPCBIJ009829 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
silene_latifolia_GWHPCBIJ009831 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
silene_latifolia_GWHPCBIJ012005 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ012006 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ012007 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ013092 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013093 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013094 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013095 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013096 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013097 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ013692 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
silene_latifolia_GWHPCBIJ013985 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ013986 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ014518 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ020299 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
silene_latifolia_GWHPCBIJ023120 Alkaloid TRI/TRII low borderline TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
silene_latifolia_GWHPCBIJ023121 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
silene_latifolia_GWHPCBIJ023122 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
silene_latifolia_GWHPCBIJ023123 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
silene_latifolia_GWHPCBIJ023124 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ023125 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
silene_latifolia_GWHPCBIJ023233 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ023234 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ023239 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ023240 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
silene_latifolia_GWHPCBIJ023242 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ028130 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
silene_latifolia_GWHPCBIJ030078 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ031257 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ031814 Alkaloid TRI/TRII low borderline TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
silene_latifolia_GWHPCBIJ031925 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
silene_latifolia_GWHPCBIJ032327 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
silene_latifolia_GWHPCBIJ033874 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
silene_latifolia_GWHPCBIJ033967 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
silene_latifolia_GWHPCBIJ034578 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB