PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ002189 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ002595 Phenylpropanoid COMT low borderline
silene_latifolia_GWHPCBIJ003741 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ003763 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ003764 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ004122 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ004123 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ004124 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ004125 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ004126 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ005878 Phenylpropanoid COMT low borderline
silene_latifolia_GWHPCBIJ006463 Phenylpropanoid COMT low borderline
silene_latifolia_GWHPCBIJ006707 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006940 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006992 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006993 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006996 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006997 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006998 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ006999 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ007000 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ007001 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ007530 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ009870 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ011754 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ011821 Phenylpropanoid COMT low borderline
silene_latifolia_GWHPCBIJ014229 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ015314 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ015315 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ015316 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ018688 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ020491 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ020562 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ023487 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ025320 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ029697 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ030872 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ030874 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ032334 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ033192 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ036330 Phenylpropanoid COMT medium pass