PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ001387 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ003279 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ003480 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ003487 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ003490 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ004415 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ004822 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ005027 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ008025 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ008225 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ008247 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ008398 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ012129 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ015662 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ016095 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ016369 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ017415 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ019661 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ020171 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ020244 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ020265 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ020687 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ023647 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ026096 Alkaloid NCS medium borderline
silene_latifolia_GWHPCBIJ033925 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ034110 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ034608 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ034710 Alkaloid NCS low borderline
silene_latifolia_GWHPCBIJ034814 Alkaloid NCS low borderline