PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
silene_latifolia_GWHPCBIJ001610 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ001680 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ002871 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ002901 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ009145 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ009182 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ011091 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ011606 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ011607 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ011611 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ011612 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ011613 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ012826 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
silene_latifolia_GWHPCBIJ018574 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ019901 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
silene_latifolia_GWHPCBIJ020942 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
silene_latifolia_GWHPCBIJ020944 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
silene_latifolia_GWHPCBIJ021362 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ021864 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
silene_latifolia_GWHPCBIJ023032 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ023033 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ023889 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ024290 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ026994 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ031731 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
silene_latifolia_GWHPCBIJ031863 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
silene_latifolia_GWHPCBIJ034862 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ034953 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ035052 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ036119 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
silene_latifolia_GWHPCBIJ036273 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
silene_latifolia_GWHPCBIJ037280 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH