PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ002392 Alkaloid T16H low borderline
silene_latifolia_GWHPCBIJ003230 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ007147 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ008415 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ010314 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ010602 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ011899 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012931 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012989 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012990 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012991 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012992 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ012993 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ013379 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ013589 Alkaloid T16H medium pass
silene_latifolia_GWHPCBIJ017344 Alkaloid T16H low borderline
silene_latifolia_GWHPCBIJ019934 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ021000 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ021691 Alkaloid T16H low borderline
silene_latifolia_GWHPCBIJ023666 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ023901 Alkaloid T16H low borderline
silene_latifolia_GWHPCBIJ025189 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ025855 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ028751 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ031129 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ034937 Alkaloid T16H medium borderline
silene_latifolia_GWHPCBIJ036351 Alkaloid T16H medium borderline