PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ002732 Terpenoid AACT medium borderline
silene_latifolia_GWHPCBIJ005063 Terpenoid AACT low borderline
silene_latifolia_GWHPCBIJ016819 Terpenoid AACT medium borderline
silene_latifolia_GWHPCBIJ019091 Terpenoid AACT medium borderline
silene_latifolia_GWHPCBIJ021616 Terpenoid AACT low borderline
silene_latifolia_GWHPCBIJ023450 Terpenoid AACT medium borderline
silene_latifolia_GWHPCBIJ030599 Terpenoid AACT low borderline
silene_latifolia_GWHPCBIJ035316 Terpenoid AACT medium borderline
silene_latifolia_GWHPCBIJ000208 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000209 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000210 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000276 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000779 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ000787 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ000806 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000809 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ000811 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ000933 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ001202 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ001811 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ002740 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ002762 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ002902 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ003084 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ003342 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ003642 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ003811 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ003978 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ004173 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ004255 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ004399 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ004619 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ005088 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ005106 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ005481 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ005516 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ005795 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ006400 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ006402 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ006485 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ006910 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ007446 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007630 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007639 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007726 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007728 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007729 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007733 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007735 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ007750 Terpenoid BAHD low borderline