PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000656 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ002823 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ003133 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ005904 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ005905 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ007836 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ008673 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ009506 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ010314 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ010602 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ013723 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ019934 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ021431 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ022687 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ022690 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ022705 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ023434 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ025189 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ026088 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ029043 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ029308 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ035241 Flavonoid FNS low borderline
silene_latifolia_GWHPCBIJ035998 Flavonoid FNS medium borderline
silene_latifolia_GWHPCBIJ036237 Flavonoid FNS medium borderline