PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
Reset
Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ002903 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ005333 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ006135 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ007343 Flavonoid IFR medium pass
silene_latifolia_GWHPCBIJ007653 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ011988 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ013408 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ013536 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ015766 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ016706 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ017921 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ020994 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ021258 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ022475 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ022487 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ022559 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ022860 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ022985 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ023447 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ023497 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ023568 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ027708 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ027850 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ029078 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ029103 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ029104 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ029105 Flavonoid IFR high pass
silene_latifolia_GWHPCBIJ029106 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ029108 Flavonoid IFR medium pass
silene_latifolia_GWHPCBIJ029171 Flavonoid IFR low borderline
silene_latifolia_GWHPCBIJ033347 Flavonoid IFR low borderline