PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000875 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ001202 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ004173 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ005516 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ005795 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ006700 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ006823 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ006910 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ008492 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ009779 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ010316 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ011313 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ011327 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ012150 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ012199 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ012513 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ015154 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ016121 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ016590 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ019619 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ019621 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ020188 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ021986 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ022550 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ023209 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ024777 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ026130 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ026603 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ028733 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ030194 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ031822 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ032185 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ032913 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ033167 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ035382 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ035446 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ036783 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ036806 Steroid SMT1/SMT2/SMT3 low borderline
silene_latifolia_GWHPCBIJ037248 Steroid SMT1/SMT2/SMT3 medium pass
silene_latifolia_GWHPCBIJ037510 Steroid SMT1/SMT2/SMT3 medium pass