PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ013172 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ013336 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ013379 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ015805 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ016270 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ016525 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ016657 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ017995 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ018026 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ018251 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ018253 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ019082 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ019680 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ021807 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022090 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022422 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022764 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022865 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022867 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022870 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ022872 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ023322 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ023665 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ023666 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ024119 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ026714 Steroid BR6OX2/CYP85A2 medium borderline
silene_latifolia_GWHPCBIJ027412 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ027501 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ027504 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ029017 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ029308 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ031107 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ031313 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ032441 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ034484 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ034500 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ034681 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ034937 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ035497 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ036420 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ037152 Steroid BR6OX2/CYP85A2 low borderline
silene_latifolia_GWHPCBIJ001225 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ002323 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ004211 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ010213 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ010215 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ010221 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ010225 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ011808 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ013027 Steroid CAS low borderline