PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ013165 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ013171 Steroid CAS medium borderline
silene_latifolia_GWHPCBIJ013187 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ013188 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ013584 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ013720 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ016555 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ017155 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ018456 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ022274 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ022996 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023424 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023427 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023432 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023437 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023440 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023441 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023442 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023443 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023444 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ023445 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ024076 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ025296 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ025297 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025298 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ025300 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ025459 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025460 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025461 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025462 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025463 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ025464 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ027376 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ027405 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ028044 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ028045 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ029251 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ030081 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ030281 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ031596 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ031597 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ031598 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ032009 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ032055 Steroid CAS medium pass
silene_latifolia_GWHPCBIJ032852 Steroid CAS low borderline
silene_latifolia_GWHPCBIJ003268 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ005904 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ005908 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ006068 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ006069 Steroid CPD/CYP90A1 low borderline