PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ006072 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ008990 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ009131 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ013159 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ017708 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ017748 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ018061 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ023434 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ023962 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ026085 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ028082 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ028481 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ032988 Steroid CPD/CYP90A1 low borderline
silene_latifolia_GWHPCBIJ034675 Steroid CPD/CYP90A1 medium borderline
silene_latifolia_GWHPCBIJ006067 Steroid CPI1 high pass
silene_latifolia_GWHPCBIJ000523 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ000526 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ000528 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ000533 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ004923 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ006182 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ010602 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ012939 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ013170 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ013173 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ017503 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ021000 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ021621 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ022894 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ025189 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ025730 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ025731 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ025853 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ025855 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ035364 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ035365 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ035369 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ035370 Steroid CYP51G1 medium borderline
silene_latifolia_GWHPCBIJ036148 Steroid CYP51G1 low borderline
silene_latifolia_GWHPCBIJ000199 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ000682 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ001227 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ003018 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ006074 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ008021 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ008032 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ008673 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ009055 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ009115 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ009684 Steroid CYP90D1 low borderline