PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ009806 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ009886 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ009887 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ010314 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ010568 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ010569 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ011177 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ011915 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ014207 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ015900 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ018238 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ018439 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ022896 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ023438 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ023771 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ024451 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ026509 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ027164 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ028020 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ028751 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ029043 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ031085 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ031308 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ031312 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ032794 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ033001 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ035659 Steroid CYP90D1 medium borderline
silene_latifolia_GWHPCBIJ035998 Steroid CYP90D1 low borderline
silene_latifolia_GWHPCBIJ009199 Steroid DET2 medium pass
silene_latifolia_GWHPCBIJ014545 Steroid DET2 medium pass
silene_latifolia_GWHPCBIJ024742 Steroid DET2 low borderline
silene_latifolia_GWHPCBIJ007010 Steroid DWF1 medium pass
silene_latifolia_GWHPCBIJ010621 Steroid DWF1 medium pass
silene_latifolia_GWHPCBIJ010672 Steroid DWF1 medium pass
silene_latifolia_GWHPCBIJ000518 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ000520 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ000521 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ000566 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ000653 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ000656 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ002456 Steroid DWF4/CYP90B1 medium pass
silene_latifolia_GWHPCBIJ002457 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ002513 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ003231 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ003273 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ005005 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ006040 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ006312 Steroid DWF4/CYP90B1 low borderline
silene_latifolia_GWHPCBIJ006405 Steroid DWF4/CYP90B1 medium borderline
silene_latifolia_GWHPCBIJ006406 Steroid DWF4/CYP90B1 medium borderline