PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Rrug07G0016490.1 rosa_rugosa Rrug07G0016490.1
Roff20730268610 rosmarinus_officinalis Roff20730268610
Roff3940140480470 rosmarinus_officinalis Roff3940140480470
RUchi05G0012490.1 rubus_chingii RUchi05G0012490.1
rubus_idaeus_g35513.t1 rubus_idaeus rubus_idaeus_g35513.t1
Rocc05G0013620.1 rubus_occidentalis Rocc05G0013620.1
Sspon.04G0006270-1A-mRNA-1:cds saccharum_spontaneum Sspon.04G0006270-1A-mRNA-1:cds
Sspp04G0020690.1 saccharum_spp_r570 Sspp04G0020690.1
salix_arbutifolia_GWHPBDOB016945 salix_arbutifolia salix_arbutifolia_GWHPBDOB016945
salix_arbutifolia_GWHPBDOB025227 salix_arbutifolia salix_arbutifolia_GWHPBDOB025227
Sbra01G0006390.1 salix_brachista Sbra01G0006390.1
Sbra03G0006860.1 salix_brachista Sbra03G0006860.1
salix_chaenomeloides_GWHPBDOA009507 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA009507
salix_chaenomeloides_GWHPBDOA015079 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA015079
salix_dunnii_KAF9685865.1 salix_dunnii salix_dunnii_KAF9685865.1
salix_purpurea_Sapur.001G081100.1.p salix_purpurea salix_purpurea_Sapur.001G081100.1.p
salix_purpurea_Sapur.003G096200.1.p salix_purpurea salix_purpurea_Sapur.003G096200.1.p
salix_suchowensis_KAG5228315.1 salix_suchowensis salix_suchowensis_KAG5228315.1
salix_suchowensis_KAG5249371.1 salix_suchowensis salix_suchowensis_KAG5249371.1
Sbow04G0004540.1 salvia_bowleyana Sbow04G0004540.1
Smil05G0029460.1 salvia_miltiorrhiza Smil05G0029460.1
salvia_rosmarinus_2073.g11.t1 salvia_rosmarinus salvia_rosmarinus_2073.g11.t1
salvia_rosmarinus_394014.g7.t1 salvia_rosmarinus salvia_rosmarinus_394014.g7.t1
ScucSacu_v1.1_s00040014710 salvinia_cucullata ScucSacu_v1.1_s00040014710
Suncscaffold_110033250 sanionia_uncinata Suncscaffold_110033250
Suncscaffold_350184000 sanionia_uncinata Suncscaffold_350184000
Suncscaffold_70256650 sanionia_uncinata Suncscaffold_70256650
santalum_album_GWHPCBHT002929 santalum_album santalum_album_GWHPCBHT002929
santalum_yasi_GWHPCBIR000154 santalum_yasi santalum_yasi_GWHPCBIR000154
sapria_himalayana_SHI18238-RA sapria_himalayana sapria_himalayana_SHI18238-RA