PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Roff10210019450 Alkaloid 16OMT medium borderline
Roff10210019460 Alkaloid 16OMT medium borderline
Roff10210019470 Alkaloid 16OMT medium borderline
Roff10210019480 Alkaloid 16OMT low borderline
Roff10210019490 Alkaloid 16OMT medium borderline
Roff10210019500 Alkaloid 16OMT medium borderline
Roff10250025620 Alkaloid 16OMT medium borderline
Roff10250025640 Alkaloid 16OMT medium borderline
Roff11530110070 Alkaloid 16OMT medium borderline
Roff11640118420 Alkaloid 16OMT low borderline
Roff12730152750 Alkaloid 16OMT medium borderline
Roff13310164610 Alkaloid 16OMT medium borderline
Roff14650190540 Alkaloid 16OMT medium borderline
Roff14650190550 Alkaloid 16OMT medium borderline
Roff26060348030 Alkaloid 16OMT low borderline
Roff3881410453560 Alkaloid 16OMT medium borderline
Roff3887820455850 Alkaloid 16OMT low borderline
Roff5760530488690 Alkaloid 16OMT medium borderline
Roff5760530488700 Alkaloid 16OMT medium borderline
Roff5760530488710 Alkaloid 16OMT medium borderline
Roff10250025650 Alkaloid 6OMT_4OMT_SOMT medium borderline
Roff13310164600 Alkaloid 6OMT_4OMT_SOMT medium borderline
Roff14650190560 Alkaloid 6OMT_4OMT_SOMT medium borderline
Roff24190318240 Alkaloid 6OMT_4OMT_SOMT medium borderline
Roff10160007970 Alkaloid 7DLGT low borderline
Roff10160009050 Alkaloid 7DLGT low borderline
Roff10170013780 Alkaloid 7DLGT medium pass
Roff10200017310 Alkaloid 7DLGT high pass
Roff10200017320 Alkaloid 7DLGT medium pass
Roff10200018180 Alkaloid 7DLGT low borderline
Roff10230022430 Alkaloid 7DLGT low borderline
Roff10230022440 Alkaloid 7DLGT medium pass
Roff10260027260 Alkaloid 7DLGT low borderline
Roff10270028400 Alkaloid 7DLGT high pass
Roff10270028410 Alkaloid 7DLGT medium pass
Roff10300044870 Alkaloid 7DLGT medium pass
Roff10420053530 Alkaloid 7DLGT high pass
Roff10440059120 Alkaloid 7DLGT medium pass
Roff10440059640 Alkaloid 7DLGT low borderline
Roff10440059650 Alkaloid 7DLGT low borderline
Roff10440059660 Alkaloid 7DLGT low borderline
Roff10490063200 Alkaloid 7DLGT medium pass
Roff10880083570 Alkaloid 7DLGT low borderline
Roff10910084650 Alkaloid 7DLGT medium pass
Roff11010086300 Alkaloid 7DLGT low borderline
Roff11470098180 Alkaloid 7DLGT low borderline
Roff11520101940 Alkaloid 7DLGT medium pass
Roff11530104680 Alkaloid 7DLGT low borderline
Roff11530110680 Alkaloid 7DLGT medium pass
Roff11530111790 Alkaloid 7DLGT high pass