PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
Roff10160004550 Alkaloid IO medium borderline
Roff10170013210 Alkaloid IO medium borderline
Roff10350049720 Alkaloid IO low borderline
Roff10420052150 Alkaloid IO low borderline
Roff10590072470 Alkaloid IO low borderline
Roff11530108450 Alkaloid IO medium borderline
Roff11530113970 Alkaloid IO low borderline
Roff12370135130 Alkaloid IO medium borderline
Roff13310164590 Alkaloid IO medium borderline
Roff13940174270 Alkaloid IO low borderline
Roff14290178340 Alkaloid IO low borderline
Roff14410185270 Alkaloid IO low borderline
Roff14410185290 Alkaloid IO low borderline
Roff14410185300 Alkaloid IO low borderline
Roff15410203600 Alkaloid IO medium borderline
Roff15410203610 Alkaloid IO medium borderline
Roff20060258210 Alkaloid IO low borderline
Roff20850269600 Alkaloid IO low borderline
Roff21350280820 Alkaloid IO medium borderline
Roff21580287620 Alkaloid IO low borderline
Roff21810292180 Alkaloid IO medium borderline
Roff24020306960 Alkaloid IO low borderline
Roff28570368800 Alkaloid IO medium borderline
Roff3155650379600 Alkaloid IO low borderline
Roff3265680383210 Alkaloid IO medium borderline
Roff3338840388330 Alkaloid IO low borderline
Roff3931510477110 Alkaloid IO low borderline
Roff5661200487350 Alkaloid IO medium borderline
Roff8300513680 Alkaloid IO medium borderline