PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Roff10190016740 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff10300045250 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
Roff10490063660 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
Roff10490063670 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
Roff10690082180 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Roff12730151860 Terpenoid TPS medium pass TPS__00037__sp_A0A2K9RG07_TPS5_VITAC
Roff14320179280 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
Roff14320179490 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
Roff14320179990 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
Roff15960213540 Terpenoid TPS medium pass TPS__00029__sp_A0A1W6QDJ1_CPS4_ISORU
Roff21790291830 Terpenoid TPS medium pass TPS__00037__sp_A0A2K9RG07_TPS5_VITAC
Roff24960330650 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
Roff26150348650 Terpenoid TPS medium pass TPS__00039__sp_A0A348AUV5_TPS1A_CAMHI
Roff26150348660 Terpenoid TPS medium pass TPS__00043__sp_A0A348AUW0_TPS1F_CAMHI
Roff27430362810 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
Roff27960366120 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff28430368310 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff2900220371180 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3303000384830 Terpenoid TPS medium pass TPS__00067__sp_C0KWV7_LNOL4_PERFR
Roff3321700386140 Terpenoid TPS medium pass TPS__00156__sp_Q4JHG3_GRNLC_PERFH
Roff3333170387540 Terpenoid TPS medium pass TPS__00156__sp_Q4JHG3_GRNLC_PERFH
Roff3419160392050 Terpenoid TPS medium pass TPS__00031__sp_A0A1X9ISH5_KSL3_ISORU
Roff3455420393870 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3473740395370 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
Roff3473740395380 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
Roff3482650396470 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
Roff3576570404090 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
Roff3593520405840 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
Roff3622000407540 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Roff3719220417680 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3811970434170 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
Roff3816900434900 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3828140437160 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3840800440430 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
Roff3877660452650 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3877660452660 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3877660452670 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Roff3894260459640 Terpenoid TPS medium pass TPS__00064__sp_C0KWV4_GRNLG_PERFH
Roff3897910461990 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
Roff3900160462950 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
Roff3900160462980 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
Roff3900160463010 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
Roff3924130473830 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
Roff4409590483770 Terpenoid TPS medium pass TPS__00156__sp_Q4JHG3_GRNLC_PERFH
Roff4409590483780 Terpenoid TPS medium pass TPS__00172__sp_R4JND9_GTPS3_THYCA
Roff4409600483800 Terpenoid TPS medium pass TPS__00156__sp_Q4JHG3_GRNLC_PERFH
Roff8210499720 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Roff8210502190 Terpenoid TPS medium pass TPS__00130__sp_J7LQ09_TPS7_PHYDL
Roff8210507770 Terpenoid TPS medium pass TPS__00128__sp_J7LMP2_TPS5_PHYDL