PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Roff10240025400 Alkaloid PMT low borderline
Roff10250026640 Alkaloid PMT low borderline
Roff10590074050 Alkaloid PMT low borderline
Roff10890083790 Alkaloid PMT medium pass
Roff11120090720 Alkaloid PMT medium pass
Roff11120090730 Alkaloid PMT medium pass
Roff11120090740 Alkaloid PMT medium pass
Roff11530104300 Alkaloid PMT medium borderline
Roff11950126330 Alkaloid PMT medium pass
Roff11950126340 Alkaloid PMT medium pass
Roff12260130920 Alkaloid PMT low borderline
Roff13680171780 Alkaloid PMT medium pass
Roff13680171800 Alkaloid PMT medium pass
Roff14340180960 Alkaloid PMT low borderline
Roff14340181910 Alkaloid PMT low borderline
Roff14700192660 Alkaloid PMT medium pass
Roff19140248520 Alkaloid PMT medium pass
Roff19140248530 Alkaloid PMT low borderline
Roff21180273520 Alkaloid PMT medium pass
Roff24210319310 Alkaloid PMT medium pass
Roff25090332810 Alkaloid PMT low borderline
Roff25090332850 Alkaloid PMT medium pass
Roff25270341380 Alkaloid PMT medium pass
Roff25270341390 Alkaloid PMT medium pass
Roff26060347400 Alkaloid PMT low borderline
Roff26060347410 Alkaloid PMT low borderline
Roff2680610354710 Alkaloid PMT low borderline
Roff27430359950 Alkaloid PMT low borderline
Roff27430360920 Alkaloid PMT low borderline
Roff3276570383660 Alkaloid PMT medium borderline
Roff3302040384660 Alkaloid PMT low borderline
Roff3708450416700 Alkaloid PMT low borderline
Roff3885760455060 Alkaloid PMT low borderline
Roff8110496920 Alkaloid PMT medium pass