PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status
Roff10300040490 Alkaloid NCS medium borderline
Roff10300041220 Alkaloid NCS medium borderline
Roff10620080210 Alkaloid NCS medium pass
Roff12350133370 Alkaloid NCS low borderline
Roff15910210810 Alkaloid NCS medium borderline
Roff15940212700 Alkaloid NCS medium pass
Roff16480215320 Alkaloid NCS medium borderline
Roff17220221120 Alkaloid NCS medium borderline
Roff17220221130 Alkaloid NCS medium borderline
Roff18590241030 Alkaloid NCS medium borderline
Roff20570263590 Alkaloid NCS medium borderline
Roff20850269480 Alkaloid NCS medium pass
Roff21180275360 Alkaloid NCS low borderline
Roff21810293720 Alkaloid NCS medium borderline
Roff22430301120 Alkaloid NCS low borderline
Roff22430301150 Alkaloid NCS low borderline
Roff2894170370180 Alkaloid NCS medium borderline
Roff29180372620 Alkaloid NCS medium borderline
Roff29180372630 Alkaloid NCS medium borderline
Roff29180372640 Alkaloid NCS medium borderline
Roff3263950383150 Alkaloid NCS medium borderline
Roff3648970410370 Alkaloid NCS medium borderline
Roff3703490415940 Alkaloid NCS medium borderline
Roff3894930460030 Alkaloid NCS medium borderline
Roff3894930460090 Alkaloid NCS medium borderline
Roff8210501070 Alkaloid NCS medium borderline
Roff8210501980 Alkaloid NCS medium borderline