PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Roff10160003070 Alkaloid GS low borderline
Roff10160008350 Alkaloid GS low borderline
Roff10230022050 Alkaloid GS low borderline
Roff10280030580 Alkaloid GS low borderline
Roff10300039780 Alkaloid GS low borderline
Roff10300043370 Alkaloid GS low borderline
Roff10330047370 Alkaloid GS low borderline
Roff10330047380 Alkaloid GS low borderline
Roff10340049420 Alkaloid GS high pass
Roff11530103770 Alkaloid GS low borderline
Roff12830155380 Alkaloid GS medium pass
Roff13130158750 Alkaloid GS low borderline
Roff13130158760 Alkaloid GS low borderline
Roff13360167620 Alkaloid GS low borderline
Roff14320180810 Alkaloid GS high pass
Roff14320180820 Alkaloid GS high pass
Roff14430186640 Alkaloid GS low borderline
Roff14430186650 Alkaloid GS low borderline
Roff14430186660 Alkaloid GS low borderline
Roff15240196670 Alkaloid GS high pass
Roff15280198310 Alkaloid GS medium pass
Roff15360200930 Alkaloid GS medium pass
Roff15360200970 Alkaloid GS medium pass
Roff15360200980 Alkaloid GS medium pass
Roff15360200990 Alkaloid GS medium pass
Roff15360202720 Alkaloid GS high pass
Roff20560263360 Alkaloid GS high pass
Roff20560263370 Alkaloid GS high pass
Roff22400300090 Alkaloid GS high pass
Roff24210319320 Alkaloid GS high pass
Roff24210319330 Alkaloid GS high pass
Roff24960329230 Alkaloid GS low borderline
Roff3105990377760 Alkaloid GS low borderline
Roff3498090398250 Alkaloid GS low borderline
Roff3506860399230 Alkaloid GS high pass
Roff3520080400520 Alkaloid GS low borderline
Roff3593790405850 Alkaloid GS low borderline
Roff3643910409710 Alkaloid GS low borderline
Roff3801080431910 Alkaloid GS low borderline
Roff3876140451850 Alkaloid GS low borderline
Roff3876140451860 Alkaloid GS low borderline
Roff3876140451870 Alkaloid GS low borderline
Roff3877580452580 Alkaloid GS high pass
Roff3899790462610 Alkaloid GS medium pass
Roff4310660483370 Alkaloid GS high pass
Roff4310670483380 Alkaloid GS high pass
Roff5896800493380 Alkaloid GS low borderline
Roff5896800493390 Alkaloid GS low borderline
Roff5896820493440 Alkaloid GS low borderline
Roff8110496710 Alkaloid GS high pass